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Human urinary biomarkers of dioxin exposure: Analysis by metabolomics and biologically driven data dimensionality reduction

机译:二恶英暴露的人类尿液生物标志物:通过代谢组学和生物驱动的数据降维进行分析

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摘要

Untargeted metabolomic approaches offer new opportunities for a deeper understanding of the molecular events related to toxic exposure. This study proposes a metabolomic investigation of biochemical alterations occurring in urine as a result of dioxin toxicity. Urine samples were collected from Czech chemical workers submitted to severe dioxin occupational exposure in a herbicide production plant in the late 1960s. Experiments were carried out with ultra-high pressure liquid chromatography (UHPLC) coupled to high-resolution quadrupole time-of-flight (QTOF) mass spectrometry. A chemistry-driven feature selection was applied to focus on steroid-related metabolites. Supervised multivariate data analysis allowed biomarkers, mainly related to bile acids, to be highlighted. These results supported the hypothesis of liver damage and oxidative stress for long-term dioxin toxicity. As a second step of data analysis, the information gained from the urine analysis of Victor Yushchenko after his poisoning was examined. A subset of relevant urinary markers of acute dioxin toxicity from this extreme phenotype, including glucuro- and sulfo-conjugated endogenous steroid metabolites and bile acids, was assessed for its ability to detect long-term effects of exposure. The metabolomic strategy presented in this work allowed the determination of metabolic patterns related to dioxin effects in human and the discovery of highly predictive subsets of biologically meaningful and clinically relevant compounds. These results are expected to provide valuable information for a deeper understanding of the molecular events related to dioxin toxicity. Furthermore, it presents an original methodology of data dimensionality reduction by using extreme phenotype as a guide to select relevant features prior to data modeling (biologically driven data reduction).
机译:非靶向代谢组学方法为深入了解与毒性暴露相关的分子事件提供了新的机会。这项研究提出了对二恶英毒性尿中发生的生化改变的代谢组学研究。尿液样本是从捷克化学工作者那里收集的,这些样本曾在1960年代后期在除草剂生产工厂中接受过严重的二恶英职业暴露。实验是用超高压液相色谱(UHPLC)结合高分辨率四极杆飞行时间(QTOF)质谱仪进行的。化学驱动的特征选择应用于重点研究类固醇相关的代谢产物。有监督的多元数据分析可以突出显示主要与胆汁酸有关的生物标志物。这些结果支持了肝损害和氧化应激对于二恶英长期毒性的假说。作为数据分析的第二步,检查了维克多·尤先科中毒后从尿液分析中获得的信息。评估了来自这种极端表型的急性二恶英毒性相关泌尿标志物的一个子集,包括葡萄糖醛和磺基缀合的内源性类固醇代谢产物和胆汁酸,以检测其长期暴露影响的能力。这项工作提出的代谢组学策略可以确定与人体内二恶英作用有关的代谢模式,并发现具有生物学意义和临床相关化合物的高预测子集。这些结果有望为深入了解与二恶英毒性有关的分子事件提供有价值的信息。此外,它通过使用极端表型作为在数据建模之前选择相关特征(生物驱动的数据缩减)的指南,提出了一种减少数据维数的原始方法。

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